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Rheumatology Advance Access originally published online on December 21, 2007
Rheumatology 2008 47(2):138-141; doi:10.1093/rheumatology/kem343
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© The Author 2007. Published by Oxford University Press on behalf of the British Society for Rheumatology. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org

Auto-antibodies, HLA and PTPN22: susceptibility markers for rheumatoid arthritis

G. Orozco1, D. Pascual-Salcedo2, M. A. López-Nevot3, T. Cobo4, A. Cabezón2, E. Martín-Mola4, A. Balsa4 and J. Martín1

1Instituto de Parasitología y Biomedicina López Neyra, CSIC, Granada, 2Servicio de Inmunología, Hospital La Paz, Madridm, 3Servicio de Inmunología, Hospital Virgen de las Nieves, Granada and 4Servicio de Reumatología, Hospital La Paz, Madrid, Spain.

Correspondence to: J. Martín, Consejo Superior de Investigaciones Científicas, Parque Tecnológico Ciencias de la Salud, Avenida del Conocimiento s/n, 18100 Armilla, Granada, Spain. E-mail: martin{at}ipb.csic.es


    Abstract
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 Acknowledgements
 References
 
Objective. To analyse the relationship between the presence of auto-antibodies [rheumatoid factor (RF) and anti-cyclic citrullinated peptide (anti-CCP)], HLA-DRB1 alleles and PTPN22 1858 C/T polymorphism and test the value of their combination as susceptibility markers for rheumatoid arthritis (RA).

Methods. Patients with early arthritis were included. At entry in the cohort or during follow-up, 191 patients fulfilled the criteria for RA and 184 individuals suffered from other arthropathies. RF was measured by nephelometry and anti-CCP antibody by enzyme-linked immunosorbent assay. HLA class II alleles were determined by polymerase chain reaction. Samples were genotyped for PTPN22 1858C/T variants using a TaqMan 5'-allele discrimination assay.

Results. The presence of shared epitope (SE) alleles was strongly associated with anti-CCP and RF-positive RA [P = 7.05 x 10–10, odds ratio (OR) 4.57, 95% confidence interval (CI) 2.76–7.57 and P = 1.68 x 10–6, OR 2.99, 95% CI 1.89–4.74, respectively). The combination of the PTPN22 1858T variant and anti-CCP antibodies gave a high specificity for the disease, and was significantly associated with RA (P = 8.86 x 10–5, OR 10.05, 95% CI 1.88–53.73).

Conclusion. The combination of the T variant of the 1858 polymorphism of the PTPN22 gene in combination with the presence of anti-CCP antibodies, preferentially in a SE-positive individual, is associated with the development of RA.

KEY WORDS: Rheumatoid arthritis, Auto-antibodies, Rheumatoid factor, Cyclic citrullinated peptides, HLA-DRB1, PTPN22 gene, Polymorphism


    Introduction
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 Acknowledgements
 References
 
Rheumatoid arthritis (RA) is a chronic inflammatory disease, affecting up to 1% of the adult population worldwide. Although the precise aetiology of RA is unknown, a strong genetic component is well established [1].

The strongest and best-known genetic association with RA is that found for particular alleles of HLA-DRB1 [2]. To date, the association of the 1858C/T polymorphism of the PTPN22 gene with RA is the most robust and reproducible one outside the HLA region [3, 4]. Recently, it has been discovered that shared epitope (SE) HLA-DRB1 alleles are exclusively associated with a subgroup of RA patients that test positive for auto-antibodies against cyclic citrullinated peptide (CCP) [5]. This has led to the establishment of a ‘citrullinated’ SE hypothesis [6, 7]. Furthermore, auto-antibodies have also been related with PTPN22 1858C/T polymorphism. Subsequent studies have confirmed this suggestion, since both RF and anti-CCP auto-antibodies have been associated with PTPN22 1858T allele [8–11]. And what is more, the combination of the 1858T variant and anti-CCP antibodies gave a 100% specificity for the disease and strongly predicted the future onset of RA [9].

In the light of these evidences, we tested the value of the combination of PTPN22 1858C/T polymorphism, HLA-DRB1 alleles and the presence of RF and anti-CCP as susceptibility markers for the onset of RA using an inception cohort of patients with inflammatory arthritis.


    Materials and methods
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 Acknowledgements
 References
 
Patients
Our cohort was comprised of 375 subjects (70% women, age 52.9 ±16.4 yrs and disease duration before entry 14.9 ± 8.1 weeks). Patients were referred to the early arthritis clinic (EAC) of La Paz University Hospital, and were included when a rheumatologist confirmed arthritis at least in one joint and if the symptoms have been present <1 yr. All patients were taking non-steroidal anti-inflammatory drugs and/or low doses of oral corticosteroids and none received disease-modifying anti-rheumatic drugs. Patients were excluded if they had crystal-induced, septic arthritis or inflammatory flares of osteoarthritis.

All patients were followed up every 6 months in the EAC for at least 2 yrs, unless they went into clinical and analytical remission and diagnosis was different from RA. At entry in the cohort or during follow-up, 191 patients fulfilled four or more of the 1987 revised American College of Rheumatology criteria for RA [12], and the remaining 184 individuals suffered from other arthropathies (mainly undifferentiated arthritis, psoriatic arthritis, reactive arthritis or undifferentiated spondyloarthropathy).

At baseline, blood tests were carried out to determine acute phase reactants and rheumatoid factor (RF) and serum samples were stored at –40°C for posterior determinations. In all patients, auto-antibodies were measured every 12 months and no change from negative to positive was seen in the first 2 yrs of the disease.

All the subjects were of Spanish Caucasian origin and were included in this study after informed consent. We obtained approval for the study from local ethical committee of the hospital.

Auto-antibodies measurement
RF was measured by nephelometry (Behring, Nephelometer Analyzer II), with a detection limit of 15 u/ml. Anti-CCP antibody was detected by a second-generation enzyme-linked immunosorbent assay in patient sera (Immunoscan RA Mark2; Eurodiagnostica, Arnhem, The Netherlands). The cut-off level for anti-CCP antibody positivity was set at 25 arbitrary units, according to the manufacturer's instructions.

Genotyping methods
DNA from patients and controls was obtained from peripheral blood, using standard methods. Samples were genotyped for PTPN22 1858C/T variants using a TaqMan 5'-allele discrimination Assay-By-Design method (Applied Biosystems, Foster City, CA, USA), as previously described [4].

HLA genotyping
Genotyping for HLA-DRB1 was carried out using a reverse dot-blot kit with sequence-specific oligonucleotide probes (Dynal RELITM SSO HLA-DRB1 typing kit; Dynal Biotech, Bromborough, UK). When necessary, high-resolution typing of HLA-DRB1*03 samples was performed using Dynal AllSetTM SSP DRB1*03.

Statistical analysis
Statistical analysis to compare allelic and genotypic distributions was performed by {chi}2-test calculated on 2 x 3 or 2 x 2 contingency tables. Statistical significance was P < 0.05. For non-parametric data analysis, Mann–Whitney U-test was used for ordinal variables and Fisher's exact test for dichotomous variables. Multivariate stepwise logistic regression analysis was performed using the Statistical Package for the Social Sciences, version 10.0 (SPSS, Chicago, IL, USA).


    Results
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 Acknowledgements
 References
 
Seropositivity for anti-CCP and RF was strongly associated with RA [P = 7.68 x 10–28, odds ratio (OR) 18.91, 95% confidence interval (CI) 10.12–35.34 and P = 2.83 x 10–26, OR 11.92, 95% CI 7.26–19.61, respectively). However, the association for the RF was weaker than that found for anti-CCP. In addition, there was a strong association between RF positivity and anti-CCP positivity (P = 3.64 x 10–21, OR 38.82, 95% CI 14.54–103.66; {kappa} = 0.667, S.E. = 0.06, 95% CI 0.56–0.78).

As shown in Table 1, the presence of SE alleles was strongly associated with anti-CCP-positive RA (P = 7.05 x 10–10, OR 4.57, 95% CI 2.76–7.57). Furthermore, the presence of DR3 allele (DRB1*0301) showed a high trend of protection against anti-CCP-positive RA (P = 0.01, OR 0.48, 95% 0.26–0.89). Similarly, DERAA alleles carriage seems to be protective for anti-CCP-positive RA (P = 0.01, OR 0.49, 96% CI 0.28–0.89). Interestingly, no association was observed with the SE in the anti-CCP-negative RA patients, indicating that the SE does not associate with RA as such, but rather with a defined anti-CCP phenotype. In addition, we did not observe any association with DERAA and DR3 alleles in the anti-CCP-negative RA patients group.


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TABLE 1. Distribution of SE, DERAA and DR3 alleles in RA patients, stratified by the presence of anti-CCP and RF, and non-RA patients

 
With regard to RF autoantibodies, the carriage of SE alleles was also associated with RA in the RF-positive patients group, due to the strong correlation between RF positivity and anti-CCP positivity (P = 1.68 x 10–6, OR 2.99, 95% CI 1.89–4.74). Moreover, no association was observed with the SE in the RF-negative RA patients. Furthermore, we found an association between the presence of the DERAA alleles and RF positivity, in a protective way (P = 0.03, OR 0.57, 95% CI 0.34–0.98). However, we did not observe any association with the carriage of the DR3 allele in the RF-positive RA group.

These data indicate that the SE alleles primarily predispose to the presence of anti-CCP antibodies, and are not an independent risk factor for the development of RA.

Regarding the PTPN22 1858C/T polymorphism, the genotype and allele distribution of the single nucleotide polymorphism (SNP) were in agreement with the Hardy–Weinberg equilibrium among both the RA patients and the non-RA patients. Allele and genotype frequencies did not differ significantly from those described in a Spanish population [4]. However, when allele or genotype frequencies were compared, no statistically significant differences were found. Thus, it seems that PTPN22 itself does not predispose to the onset of RA in our inception cohort of patients with inflammatory arthritis from Spain, which is in contrast with the previously reported association of PTPN22 with RA compared with the general Spanish population [4].

Next, we analysed the relationships between the PTPN22 1858C/T polymorphism and antibodies to CCP and the RF (Table 2). The combination of the 1858T variant and anti-CCP antibodies gave a high specificity for the disease (83.2%, calculated as number of patients with a true negative test divided by the total number of patients without the disease), since only one of the controls presented this combination. This patient suffered from palindromic rheumatism that has been described to be an abortive form of RA and without treatment can progress to RA [13]. Carriage of the PTPN22 1858T variant and presence of anti-CCP antibodies were significantly associated with the development of RA, compared with the rest of combinations (P = 8.86 x 10–5, OR 10.06, 95% CI 1.88–53.73), whereas the combination of the lack of the T variant of the SNP and anti-CCP negativity was strongly protective (P = 8.2 x 10–21, OR 0.12, 95% CI 0.07–0.19). We also observed an association with RA for the combination of the T variant and the presence of RF antibodies (P = 0.002, OR 4.18, 95% CI 1.47–11.91); however, this association was much weaker than that found for the combination of the PTPN22 T allele and anti-CCP auto-antibodies.


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TABLE 2. Distribution of the PTPN22 1858C/T SNP stratified by the presence of anti-CCP and RF antibodies

 
The distribution in RA patients and non-RA patients in the combination of the presence of SE, anti-CCP and T allele of the PTPN22 polymorphism did not reach statistically significant differences, probably due to the relatively low number of individuals included in the study and the high degree of stratification performed (data not shown).

Using multivariate stepwise logistic regression analysis with all variables included and RA diagnosis as a dependent variable, only anti-CCP and RF auto-antibodies entered in the forward and backward method (OR 22.4, 95% CI 11.2–44.6 and OR 9.8, 95% CI4.3–22.0, respectively).


    Discussion
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 Acknowledgements
 References
 
The most interesting findings of this work are the following: (i) the presence of the SE allele is strongly associated with anti-CCP positivity, although the SE does not associate with RA as such, but rather with a defined anti-CCP phenotype, and (ii) the combination of the 1858T variant and anti-CCP antibodies gave a high specificity for the disease. Therefore, we have replicated previously described remarkable findings in an ethnically different Spanish cohort [5, 9, 14–16]. Despite the high specificity for RA given by the 1858T variant of the PTPN22 gene and seropositivity for anti-CCP, this test had low sensitivity for RA diagnostic. Therefore, in order to establish a combination of variables as a diagnostic tool, it would be necessary to include other markers of severity/outcome, such as radiological changes or bone erosions. Unfortunately, these data were not available for our cohort. However, our data suggest that PTPN22 polymorphism and anti-CCP might be helpful as RA prognostic markers.

Our data, together with data from other groups [14, 17–20] suggest that the SE alleles predispose for anti-CCP positivity rather than for RA. Thus, it has been proposed the hypothesis that HLA SE containing molecules play a role in the activation of CD4+ T cells through preferential presentation of citrullinated antigens. These citrulline-specific T cells may provide the help required for the IgG antibodies response to citrullinated antigens. On the basis of these and other data, van Gaalen et al. [7] formulated a two-hit model for the pathogenesis of RA, which incorporates a novel ‘citrullinated’ SE hypothesis.

In addition, we have found that the absence of HLA-DRB1*0301 is associated with anti-CCP-positive RA, which is slightly different from the finding by Verpoort et al. [21] and Irigoyen et al. [22] who stated that HLA-DR3 is associated with anti-CCP-negative RA. They proposed that this association is not due to the HLA-DR3 gene itself, but to other genes in linkage disequilibrium with it. In this sense, a microsatellite marker (MIB*350) that is part of an ancestral haplotype associated with DRB1*0301 was described as a risk factor for RA in Dutch and Spanish populations independently of DR3 [23, 24]. Nevertheless, it remains unclear as to which locus inside this cluster is responsible for the association. A fine mapping of this locus could help to shed light on the different associations between DR3 and anti-CCP positivity in North American, Dutch and Spanish populations.

We found an association between the absence of the protective DERAA alleles and anti-CCP and RF-positive RA. However, DERAA alleles were not associated with anti-CCP and RF-negative RA. This is in contrast with previous findings that show that the protective effect of DERAA is independent of the patient's anti-CCP status [21, 25].

We have replicated the finding that carriage of the T allele of this polymorphism, in combination with seropositivity for anti-CCP auto-antibodies predisposes for RA and has a high specificity for the disease [9], suggesting that the T variant could influence the outcome of RA once auto-antibodies, such as anti-CCP auto-antibodies, have developed. In fact, the only non-RA patient in this cohort with anti-CCP antibodies and the T variant, has palindromic rheumatism that has been described as an abortive form of RA [13]. Nevertheless, a relatively low number of patients were included in the study. Therefore, further investigation using bigger cohorts is needed in order to confirm the possible clinical application of these markers.

We did not observe any association of the T allele with RA in combination with the presence of the RF in accordance with previous works [4, 26, 27], which strengthens the arising hypothesis that anti-CCP, rather than RF, are the auto-antibodies that characterize RA. This also could explain why PTPN22 1858C/T is not associated with several auto-immune diseases in which auto-antibodies are present, such as coeliac disease [28], since the polymorphism was proposed as a common genetic marker for auto-antibody-mediated auto-immune disease [29]. In the light of these evidences, it seems that the SNP could be involved in the regulation of some auto-antibodies, such as anti-CCP, but not others, such as RF. Thus, the implication of PTPN22 in auto-immunity seems to be conditioned to the auto-antibody milieu of each disease.

Formula


    Acknowledgements
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 Acknowledgements
 References
 
We thank Ma Paz Ruiz Blas and Antonia Martín for excellent technical assistance, Rosario Madero for her statistical work and patients for their essential collaboration.

Funding: This work was supported by grant FER/Abbott 2004 and Plan Nacional de I+D (grants SAF03-3460 and SAF06-00398).

Disclosure statement: The authors have declared no conflicts of interest.


    References
 Top
 Abstract
 Introduction
 Materials and methods
 Results
 Discussion
 Acknowledgements
 References
 

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Submitted 24 July 2007; revised version accepted 19 November 2007.
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